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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G23150.1
PEP
AT5G23150.1
Position on the Genome Chromosome Chr5
Start Position 7786173
End Position 7792080
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00134780
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RNA polymerase II-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
ENHANCER OF AG-4 protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04818,PF00855
Pfam Description Details
InterPro ID
IPR006569,IPR035496,IPR008942,IPR000313
InterPro Description Details
GO ID
GO:0048510,GO:0003712,GO:0003700,GO:0005634,GO:0043481,GO:0006357,GO:0009910,GO:0030154,GO:0006397,GO:0048497,GO:0003690
GO Description Details
GOslim ID
GO:0050789,GO:0006351,GO:0003676,GO:0009059,GO:0032501,GO:0000003,GO:0065009,GO:0005634,GO:0016070,GO:0032502,GO:0006396,GO:0050896,GO:0043473
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
ENHANCER OF AG-4 protein 2
OrthoDB(1 item)
11714at33090
RNA polymerase II-binding domain
Pfam(2 items)
 
RNA polymerase II-binding domain.
 
PWWP domain
InterPro(4 items)
 
HDGF-rel_PWWP
Gene ontology(11 items)
BP
regulation of timing of transition from vegetative to reproductive phase
MF
transcription coregulator activity
MF
DNA-binding transcription factor activity
BP
anthocyanin accumulation in tissues in response to UV light
BP
regulation of transcription by RNA polymerase II
BP
negative regulation of flower development
BP
cell differentiation
BP
mRNA processing
BP
maintenance of floral organ identity
MF
double-stranded DNA binding
GO slim(13 items)
BP
regulation of biological process
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
macromolecule biosynthetic process
BP
multicellular organismal process
BP
regulation of molecular function
BP
RNA metabolic process
BP
developmental process
BP
RNA processing
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.