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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G23070.1
PEP
AT5G23070.1
Position on the Genome Chromosome Chr5
Start Position 7741979
End Position 7742827
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00250247
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thymidine kinase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thymidine kinase b
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00265
Pfam Description Details
InterPro ID
IPR001267,IPR027417,IPR020633
InterPro Description Details
GO ID
GO:0009409,GO:0009507,GO:0046872,GO:0046104,GO:0042802,GO:0004797,GO:0090351,GO:0071897,GO:0005524
GO Description Details
GOslim ID
GO:0000166,GO:0043167,GO:0009117,GO:0005515,GO:0009536,GO:0009059,GO:0032501,GO:0006259,GO:0016740,GO:0050896,GO:0032502,GO:0009116
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G23070
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Thymidine kinase b
OrthoDB(1 item)
173215at33090
Thymidine kinase
Pfam(1 item)
 
Thymidine kinase
InterPro(3 items)
 
Thymidine kinase
 
P-loop_NTPase
 
Thymidine_kinase_CS
Gene ontology(9 items)
BP
response to cold
MF
metal ion binding
BP
thymidine metabolic process
MF
identical protein binding
MF
thymidine kinase activity
BP
seedling development
BP
DNA biosynthetic process
GO slim(12 items)
MF
nucleotide binding
BP
nucleotide metabolic process
MF
protein binding
BP
macromolecule biosynthetic process
BP
multicellular organismal process
BP
DNA metabolic process
MF
transferase activity
BP
response to stimulus
BP
developmental process
BP
nucleoside metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.