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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G23010.2
PEP
AT5G23010.2
Position on the Genome Chromosome Chr5
Start Position 7703089
End Position 7706769
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00741426
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Methylthioalkylmalate synthase 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00682
Pfam Description Details
InterPro ID
IPR000891,IPR013785,IPR002034
InterPro Description Details
GO ID
GO:0019752,GO:0046912
GO Description Details
GOslim ID
GO:0016740,GO:0006082
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Methylthioalkylmalate synthase 1
OrthoDB(1 item)
69763at33090
2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Pfam(1 item)
 
HMGL-like
InterPro(3 items)
 
Pyruvate carboxyltransferase
 
AIPM/Hcit_synth_CS
Gene ontology(2 items)
BP
carboxylic acid metabolic process
MF
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO slim(2 items)
MF
transferase activity
BP
organic acid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.