Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G22800.2
PEP
AT5G22800.2
Position on the Genome Chromosome Chr5
Start Position 7616221
End Position 7620273
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01646367
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alanine--tRNA ligase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Probable alanine--tRNA ligase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01411,PF07973,PF02272
Pfam Description Details
InterPro ID
IPR012947,IPR009000,IPR018164,IPR003156,IPR018162,IPR018163,IPR023033,IPR018165,IPR027522,IPR002318
InterPro Description Details
GO ID
GO:0008270,GO:0005739,GO:0005524,GO:0009507,GO:0016021,GO:0004813,GO:0000049,GO:0006419
GO Description Details
GOslim ID
GO:0016070,GO:0005739,GO:0016020,GO:0043167,GO:0009536,GO:0000166,GO:0006520,GO:0016874,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.