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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G19920.1
PEP
AT5G19920.1
Position on the Genome Chromosome Chr5
Start Position 6733622
End Position 6737266
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00434335
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40-repeat-containing domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00400
Pfam Description Details
InterPro ID
IPR036322,IPR001680,IPR017986,IPR015943
InterPro Description Details
GO ID
NA
GO Description
GOslim ID
NA
GO slim Description
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
69086at33090
WD40-repeat-containing domain
Pfam(1 item)
 
WD domain, G-beta repeat
InterPro(4 items)
 
WD40_repeat_dom_sf
 
WD40_repeat_dom
 
WD40/YVTN_repeat-like_dom_sf

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.