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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G19200.1
PEP
AT5G19200.1
Position on the Genome Chromosome Chr5
Start Position 6458995
End Position 6460690
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01962172
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Short-chain dehydrogenase/reductase, conserved site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
3-dehydrosphinganine reductase TSC10B
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00106
Pfam Description Details
InterPro ID
IPR020904,IPR002347,IPR036291
InterPro Description Details
GO ID
GO:0006666,GO:0016021,GO:0030148,GO:0005783,GO:0005789,GO:0047560
GO Description Details
GOslim ID
GO:0042180,GO:0006807,GO:0005783,GO:0016020,GO:0016491,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G19200
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.