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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G18410.1
PEP
AT5G18410.1
Position on the Genome Chromosome Chr5
Start Position 6097456
End Position 6104783
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00111404
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cytoplasmic FMR1-interacting
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein PIR
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF07159,PF05994
Pfam Description Details
InterPro ID
IPR009828,IPR008081
InterPro Description Details
GO ID
GO:0030036,GO:0048365,GO:0045010,GO:0000340,GO:0010090,GO:0006417,GO:0031209,GO:0000902
GO Description Details
GOslim ID
GO:0050789,GO:0032502,GO:0051258,GO:0005737,GO:0003676,GO:0065008,GO:0032991,GO:0005515,GO:0006996
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G18410
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein PIR
OrthoDB(1 item)
2741at33090
Cytoplasmic FMR1-interacting
Pfam(2 items)
 
Protein of unknown function (DUF1394)
 
Cytoplasmic Fragile-X interacting family
InterPro(2 items)
 
Protein of unknown function DUF1394
 
Cytoplasmic FMR1-interacting
Gene ontology(8 items)
BP
actin cytoskeleton organization
MF
small GTPase binding
BP
actin nucleation
MF
RNA 7-methylguanosine cap binding
BP
trichome morphogenesis
BP
regulation of translation
BP
cell morphogenesis
GO slim(9 items)
BP
regulation of biological process
BP
developmental process
BP
protein polymerization
MF
nucleic acid binding
BP
regulation of biological quality
CC
protein-containing complex
MF
protein binding
BP
organelle organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.