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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G17230.4
PEP
AT5G17230.4
Position on the Genome Chromosome Chr5
Start Position 5659839
End Position 5662087
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00077427
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Squalene/phytoene synthase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phytoene synthase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR033904,IPR008949,IPR002060,IPR019845
InterPro Description Details
GO ID
GO:0051996,GO:0016117,GO:0009507,GO:0004310,GO:0016767,GO:0031969
GO Description Details
GOslim ID
GO:0009536,GO:0044255,GO:0016740,GO:0042440,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G17230
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.