Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G16970.1
PEP
AT5G16970.1
Position on the Genome Chromosome Chr5
Start Position 5576291
End Position 5578001
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00249098
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alcohol dehydrogenase, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
NADPH-dependent oxidoreductase 2-alkenal reductase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF16884,PF00107
Pfam Description Details
InterPro ID
IPR036291,IPR020843,IPR011032,IPR041694,IPR013149
InterPro Description Details
GO ID
GO:0006979,GO:0005634,GO:0009536,GO:0032440,GO:0005654,GO:0005829,GO:0046686
GO Description Details
GOslim ID
GO:0050896,GO:0005634,GO:0005737,GO:0009536,GO:0016491
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G16970
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
NADPH-dependent oxidoreductase 2-alkenal reductase
OrthoDB(1 item)
115662at33090
Alcohol dehydrogenase, C-terminal
Pfam(2 items)
 
N-terminal domain of oxidoreductase
 
Zinc-binding dehydrogenase
InterPro(5 items)
 
NAD(P)-bd_dom_sf
 
GroES-like_sf
 
Alcohol dehydrogenase, C-terminal
Gene ontology(7 items)
BP
response to oxidative stress
MF
2-alkenal reductase [NAD(P)+] activity
BP
response to cadmium ion
GO slim(5 items)
BP
response to stimulus
MF
oxidoreductase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.