Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G16280.2
PEP
AT5G16280.2
Position on the Genome Chromosome Chr5
Start Position 5323377
End Position 5331345
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00203988
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
TRAPP II complex, Trs120
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Tetratricopeptide repeat (TPR)-like superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12739
Pfam Description Details
InterPro ID
IPR024420,IPR011990
InterPro Description Details
GO ID
GO:0000045,GO:0000407,GO:0034497,GO:0031410,GO:1990072,GO:0030242,GO:0006888
GO Description Details
GOslim ID
GO:0005737,GO:0005794,GO:0019787,GO:0022607,GO:0022411,GO:0007033,GO:0007031,GO:0008233,GO:0051641,GO:0016192,GO:0008641,GO:0043229,GO:0032991,GO:0006914,GO:0031982
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.