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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G15450.1
PEP
AT5G15450.1
Position on the Genome Chromosome Chr5
Start Position 5014399
End Position 5018255
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319038
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Clp, N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Chaperone protein ClpB3, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF17871,PF07724,PF00004,PF10431,PF02861
Pfam Description Details
InterPro ID
IPR018368,IPR003593,IPR041546,IPR003959,IPR019489,IPR027417,IPR004176,IPR036628,IPR001270,IPR017730,IPR028299
InterPro Description Details
GO ID
GO:0042026,GO:0005524,GO:0009507,GO:0016887,GO:0034605,GO:0009570,GO:0006986,GO:0005737,GO:0009658,GO:0009536,GO:0009532,GO:0009408
GO Description Details
GOslim ID
GO:0009536,GO:0043167,GO:0050896,GO:0009657,GO:0000166,GO:0006457,GO:0016787,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G15450
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Chaperone protein ClpB3, chloroplastic
OrthoDB(1 item)
24254at33090
Clp, N-terminal
Pfam(5 items)
 
AAA_lid_9
 
AAA domain (Cdc48 subfamily)
 
ATPase family associated with various cellular activities (AAA)
 
C-terminal, D2-small domain, of ClpB protein
 
Clp amino terminal domain, pathogenicity island component
InterPro(11 items)
 
AAA+ ATPase domain
 
ClpA/ClpB_AAA_lid
 
ATPase, AAA-type, core
 
Clp ATPase, C-terminal
 
P-loop_NTPase
 
Clp, N-terminal
 
Chaperonin_ClpB
Gene ontology(12 items)
BP
protein refolding
MF
ATPase activity
BP
cellular response to heat
CC
chloroplast stroma
BP
response to unfolded protein
BP
chloroplast organization
CC
plastid stroma
BP
response to heat
GO slim(8 items)
BP
response to stimulus
BP
plastid organization
MF
nucleotide binding
BP
protein folding
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.