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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G13630.1
PEP
AT5G13630.1
Position on the Genome Chromosome Chr5
Start Position 4387567
End Position 4392082
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00452070
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
magnesium-chelatase subunit ChlH, chloroplastic
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Magnesium-chelatase subunit ChlH, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02514,PF11965
Pfam Description Details
InterPro ID
IPR022571,IPR011771,IPR003672
InterPro Description Details
GO ID
GO:0010007,GO:0005739,GO:0003729,GO:0015979,GO:0009570,GO:0015995,GO:0016851,GO:0005524,GO:0009536,GO:0009706,GO:0009507
GO Description Details
GOslim ID
GO:0006725,GO:0046483,GO:0006807,GO:0003676,GO:0009536,GO:0042440,GO:0043167,GO:0015979,GO:0016874,GO:0005739,GO:0000166,GO:0032991,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G13630
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Magnesium-chelatase subunit ChlH, chloroplastic
OrthoDB(1 item)
2102at33090
magnesium-chelatase subunit ChlH, chloroplastic
Pfam(2 items)
 
CobN/Magnesium Chelatase
 
Domain of unknown function (DUF3479)
InterPro(3 items)
 
Magnesium chelatase, subunit H, N-terminal
 
CobN/magnesium chelatase
Gene ontology(11 items)
CC
magnesium chelatase complex
CC
mitochondrion
BP
photosynthesis
CC
chloroplast stroma
BP
chlorophyll biosynthetic process
MF
magnesium chelatase activity
CC
chloroplast inner membrane
GO slim(13 items)
BP
cellular aromatic compound metabolic process
BP
heterocycle metabolic process
BP
nitrogen compound metabolic process
MF
nucleic acid binding
BP
pigment metabolic process
BP
photosynthesis
MF
ligase activity
CC
mitochondrion
MF
nucleotide binding
CC
protein-containing complex

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.