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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G13200.1
PEP
AT5G13200.1
Position on the Genome Chromosome Chr5
Start Position 4207081
End Position 4208079
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00649481
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
GEM-like protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
GEM-like protein 5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02893
Pfam Description Details
InterPro ID
IPR004182,IPR037848
InterPro Description Details
GO ID
GO:0010029,GO:0009793,GO:0009845,GO:0009536,GO:0098755
GO Description Details
GOslim ID
GO:0009536,GO:0032501,GO:0032502,GO:0000003,GO:0050789,GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GEM-like protein 5
OrthoDB(1 item)
166241at33090
GEM-like protein
Pfam(1 item)
 
GRAM domain
InterPro(2 items)
Gene ontology(5 items)
BP
regulation of seed germination
BP
embryo development ending in seed dormancy
BP
seed germination
BP
maintenance of seed dormancy by absisic acid
GO slim(6 items)
BP
multicellular organismal process
BP
developmental process
BP
regulation of biological process
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.