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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G10790.1
PEP
AT5G10790.1
Position on the Genome Chromosome Chr5
Start Position 3410638
End Position 3412559
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00249358
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ubiquitinyl hydrolase 1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ubiquitin C-terminal hydrolase 22
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02148,PF00443
Pfam Description Details
InterPro ID
IPR038765,IPR013083,IPR028889,IPR018200,IPR001607,IPR001394
InterPro Description Details
GO ID
GO:0016579,GO:0004843,GO:0006511,GO:0008270,GO:0008234,GO:0070461
GO Description Details
GOslim ID
GO:0009057,GO:0008233,GO:0043167,GO:0031248,GO:0006464,GO:0005634,GO:0006508
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G10790
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Ubiquitin C-terminal hydrolase 22
OrthoDB(1 item)
106882at33090
Ubiquitinyl hydrolase 1
Pfam(2 items)
 
Zn-finger in ubiquitin-hydrolases and other protein
 
Ubiquitin carboxyl-terminal hydrolase
InterPro(6 items)
 
Papain-like_cys_pep_sf
 
Znf_RING/FYVE/PHD
 
Zinc finger, UBP-type
 
Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Gene ontology(6 items)
BP
protein deubiquitination
MF
thiol-dependent ubiquitin-specific protease activity
BP
ubiquitin-dependent protein catabolic process
MF
zinc ion binding
MF
cysteine-type peptidase activity
CC
SAGA-type complex
GO slim(7 items)
BP
macromolecule catabolic process
MF
peptidase activity
CC
protein acetyltransferase complex
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.