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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G10720.1
PEP
AT5G10720.1
Position on the Genome Chromosome Chr5
Start Position 3386835
End Position 3390541
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00396351
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Histidine kinase 5
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02518,PF00072,PF00512
Pfam Description Details
InterPro ID
IPR005467,IPR036890,IPR011006,IPR003594,IPR035965,IPR036097,IPR001789,IPR003661,IPR004358
InterPro Description Details
GO ID
GO:0005773,GO:0048364,GO:0005886,GO:0046872,GO:0070301,GO:0006952,GO:0071219,GO:0046777,GO:0010105,GO:0000155,GO:0009738,GO:0005737,GO:0009788,GO:0009927,GO:0071732,GO:0090333,GO:0005887,GO:0009736,GO:0009873,GO:0004673
GO Description Details
GOslim ID
GO:0006464,GO:0032502,GO:0050789,GO:0007154,GO:0050896,GO:0006793,GO:0010118,GO:0032501,GO:0016020,GO:0016740,GO:0043167,GO:0005575,GO:0005737,GO:0005773,GO:0044419,GO:0060089
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Histidine kinase 5
OrthoDB(1 item)
24917at33090
Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
Pfam(3 items)
 
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 
Response regulator receiver domain
 
His Kinase A (phospho-acceptor) domain
InterPro(9 items)
 
His_kinase_dom
 
CheY-like_superfamily
 
Histidine kinase/HSP90-like ATPase
 
PAS-like_dom_sf
 
HisK_dim/P_sf
 
Signal transduction response regulator, receiver domain
 
Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
 
Sig_transdc_His_kin-like_C
Gene ontology(20 items)
BP
root development
CC
plasma membrane
MF
metal ion binding
BP
cellular response to hydrogen peroxide
BP
defense response
BP
cellular response to molecule of bacterial origin
BP
protein autophosphorylation
BP
negative regulation of ethylene-activated signaling pathway
MF
phosphorelay sensor kinase activity
BP
abscisic acid-activated signaling pathway
BP
negative regulation of abscisic acid-activated signaling pathway
MF
histidine phosphotransfer kinase activity
BP
cellular response to nitric oxide
BP
regulation of stomatal closure
CC
integral component of plasma membrane
BP
cytokinin-activated signaling pathway
BP
ethylene-activated signaling pathway
MF
protein histidine kinase activity
GO slim(16 items)
BP
cellular protein modification process
BP
developmental process
BP
regulation of biological process
BP
cell communication
BP
response to stimulus
BP
phosphorus metabolic process
BP
stomatal movement
BP
multicellular organismal process
MF
transferase activity
CC
cellular_component
BP
interspecies interaction between organisms
MF
molecular transducer activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.