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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G08390.1
PEP
AT5G08390.1
Position on the Genome Chromosome Chr5
Start Position 2701448
End Position 2706910
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00674578
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Katanin p80 WD40 repeat-containing subunit B1 homolog
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00400,PF13925
Pfam Description Details
InterPro ID
IPR028021,IPR019775,IPR036322,IPR001680,IPR017986,IPR020472,IPR015943,IPR026962
InterPro Description Details
GO ID
GO:0005737,GO:0007019,GO:0051013,GO:0015630,GO:0008017,GO:0080008,GO:0008352,GO:0051510,GO:0005874
GO Description Details
GOslim ID
GO:0005515,GO:0032991,GO:0005737,GO:0051261,GO:0006996,GO:0005856,GO:0032502,GO:0000151,GO:0016049,GO:0050789,GO:0016043
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G08390
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.