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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G07690.1
PEP
AT5G07690.1
Position on the Genome Chromosome Chr5
Start Position 2447090
End Position 2448285
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00415719
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SANT/Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor MYB29
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR017930,IPR001005,IPR009057
InterPro Description Details
GO ID
GO:0009819,GO:0009625,GO:0010439,GO:0009414,GO:0009611,GO:0003700,GO:1905255,GO:0009867,GO:0005634,GO:0010105,GO:0009682,GO:0010438,GO:0009755,GO:0009644,GO:0009617,GO:0031930,GO:2000070,GO:0003677,GO:0006355,GO:0050832
GO Description Details
GOslim ID
GO:0003676,GO:0044419,GO:0050789,GO:0002376,GO:0005975,GO:0006082,GO:0050896,GO:0007154,GO:0005575,GO:0006351,GO:0005634,GO:0065009,GO:0006790,GO:0006807,GO:0019748
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
MYB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G07690
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor MYB29
OrthoDB(1 item)
124611at33090
SANT/Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(3 items)
 
SANT/Myb domain
 
Homeobox-like_sf
Gene ontology(20 items)
BP
drought recovery
BP
response to insect
BP
regulation of glucosinolate biosynthetic process
BP
response to water deprivation
BP
response to wounding
MF
DNA-binding transcription factor activity
BP
regulation of RNA binding transcription factor activity
BP
jasmonic acid mediated signaling pathway
BP
negative regulation of ethylene-activated signaling pathway
BP
induced systemic resistance
BP
cellular response to sulfur starvation
BP
hormone-mediated signaling pathway
BP
response to high light intensity
BP
response to bacterium
BP
mitochondria-nucleus signaling pathway
BP
regulation of response to water deprivation
BP
regulation of transcription, DNA-templated
BP
defense response to fungus
GO slim(15 items)
MF
nucleic acid binding
BP
interspecies interaction between organisms
BP
regulation of biological process
BP
immune system process
BP
carbohydrate metabolic process
BP
organic acid metabolic process
BP
response to stimulus
BP
cell communication
CC
cellular_component
BP
transcription, DNA-templated
BP
regulation of molecular function
BP
sulfur compound metabolic process
BP
nitrogen compound metabolic process
BP
secondary metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.