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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G07210.1
PEP
AT5G07210.1
Position on the Genome Chromosome Chr5
Start Position 2252237
End Position 2256018
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00685406
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Signal transduction response regulator, receiver domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Two-component response regulator
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00072
Pfam Description Details
InterPro ID
IPR017053,IPR001789,IPR009057,IPR011006,IPR006447
InterPro Description Details
GO ID
GO:0003700,GO:0003677,GO:0009736,GO:0000160,GO:0005634
GO Description Details
GOslim ID
GO:0005575,GO:0050789,GO:0007154,GO:0050896,GO:0006351,GO:0003676,GO:0065009,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ARR-B family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Two-component response regulator
OrthoDB(1 item)
78505at33090
Signal transduction response regulator, receiver domain
Pfam(1 item)
 
Response regulator receiver domain
InterPro(5 items)
 
Response_reg_B-typ_pln
 
Signal transduction response regulator, receiver domain
 
Homeobox-like_sf
 
CheY-like_superfamily
 
Myb_dom_plants
Gene ontology(5 items)
MF
DNA-binding transcription factor activity
BP
cytokinin-activated signaling pathway
BP
phosphorelay signal transduction system
GO slim(8 items)
CC
cellular_component
BP
regulation of biological process
BP
cell communication
BP
response to stimulus
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.