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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G07130.1
PEP
AT5G07130.1
Position on the Genome Chromosome Chr5
Start Position 2210567
End Position 2212525
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00459836
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Laccase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Laccase-13
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00394,PF07731,PF07732
Pfam Description Details
InterPro ID
IPR034289,IPR034285,IPR002355,IPR033138,IPR034288,IPR011707,IPR008972,IPR011706,IPR017761,IPR001117
InterPro Description Details
GO ID
GO:0046274,GO:0048046,GO:0052716,GO:0005507,GO:0016491
GO Description Details
GOslim ID
GO:0016491,GO:0006725,GO:0043167,GO:0005576,GO:0019748
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G07130
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Laccase-13
OrthoDB(1 item)
Pfam(3 items)
 
Multicopper oxidase
 
Multicopper oxidase
 
Multicopper oxidase
InterPro(10 items)
 
Cu_oxidase_Cu_BS
 
Cu_oxidase_CS
 
Multicopper oxidase, type 3
 
Multicopper oxidase, type 2
 
Multicopper oxidase, type 1
Gene ontology(5 items)
BP
lignin catabolic process
MF
hydroquinone:oxygen oxidoreductase activity
MF
copper ion binding
MF
oxidoreductase activity
GO slim(5 items)
MF
oxidoreductase activity
BP
cellular aromatic compound metabolic process
CC
extracellular region
BP
secondary metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.