Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G07100.1
PEP
AT5G07100.1
Position on the Genome Chromosome Chr5
Start Position 2204313
End Position 2205647
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00395452
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable WRKY transcription factor 26
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03106
Pfam Description Details
InterPro ID
IPR003657,IPR036576
InterPro Description Details
GO ID
GO:0003700,GO:0046872,GO:0034605,GO:0005634,GO:0043565,GO:0070370
GO Description Details
GOslim ID
GO:0065009,GO:0050896,GO:0005634,GO:0050789,GO:0003676,GO:0006351,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Probable WRKY transcription factor 26
OrthoDB(1 item)
123132at33090
WRKY domain
Pfam(1 item)
 
WRKY DNA -binding domain
InterPro(2 items)
Gene ontology(6 items)
MF
DNA-binding transcription factor activity
MF
metal ion binding
BP
cellular response to heat
MF
sequence-specific DNA binding
BP
cellular heat acclimation
GO slim(7 items)
BP
regulation of molecular function
BP
response to stimulus
BP
regulation of biological process
MF
nucleic acid binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.