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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G03720.1
PEP
AT5G03720.1
Position on the Genome Chromosome Chr5
Start Position 971913
End Position 973683
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00138185
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Heat shock factor (HSF)-type, DNA-binding
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
HSF_DOMAIN domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00447
Pfam Description Details
InterPro ID
IPR000232,IPR027725,IPR036388,IPR036390
InterPro Description Details
GO ID
GO:0005634,GO:0003700,GO:0043565
GO Description Details
GOslim ID
GO:0050789,GO:0006351,GO:0003676,GO:0005634,GO:0065009
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
HSF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
HSF_DOMAIN domain-containing protein
OrthoDB(1 item)
206694at33090
Heat shock factor (HSF)-type, DNA-binding
Pfam(1 item)
 
HSF-type DNA-binding
InterPro(4 items)
 
Heat shock factor (HSF)-type, DNA-binding
 
WH-like_DNA-bd_sf
Gene ontology(3 items)
MF
DNA-binding transcription factor activity
MF
sequence-specific DNA binding
GO slim(5 items)
BP
regulation of biological process
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.