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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G39830.1
PEP
AT4G39830.1
Position on the Genome Chromosome Chr4
Start Position 18479103
End Position 18481184
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00293479
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Multicopper oxidase, type 1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
L-ascorbate oxidase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00394,PF07732,PF07731
Pfam Description Details
InterPro ID
IPR008972,IPR011706,IPR033138,IPR002355,IPR011707,IPR001117,IPR034259,IPR034267,IPR034258,IPR017760
InterPro Description Details
GO ID
GO:0005507,GO:0016491,GO:1900367,GO:0008447,GO:0005576
GO Description Details
GOslim ID
GO:0044419,GO:0050789,GO:0016491,GO:0050896,GO:0043167,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
L-ascorbate oxidase
OrthoDB(1 item)
40377at33090
Multicopper oxidase, type 1
Pfam(3 items)
 
Multicopper oxidase
 
Multicopper oxidase
 
Multicopper oxidase
InterPro(10 items)
 
Multicopper oxidase, type 2
 
Cu_oxidase_CS
 
Cu_oxidase_Cu_BS
 
Multicopper oxidase, type 3
 
Multicopper oxidase, type 1
 
L-ascorbate_oxidase_pln
Gene ontology(5 items)
MF
copper ion binding
MF
oxidoreductase activity
BP
positive regulation of defense response to insect
MF
L-ascorbate oxidase activity
CC
extracellular region
GO slim(6 items)
BP
interspecies interaction between organisms
BP
regulation of biological process
MF
oxidoreductase activity
BP
response to stimulus
CC
extracellular region

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.