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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G39330.1
PEP
AT4G39330.1
Position on the Genome Chromosome Chr4
Start Position 18291268
End Position 18292772
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00679147
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alcohol dehydrogenase, N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable cinnamyl alcohol dehydrogenase 9
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF08240,PF00107
Pfam Description Details
InterPro ID
IPR013149,IPR013154,IPR002328,IPR011032,IPR036291,IPR020843
InterPro Description Details
GO ID
GO:0016616,GO:0045551,GO:0052747,GO:0005886,GO:0048046,GO:0009809,GO:0008270,GO:0005829
GO Description Details
GOslim ID
GO:0016020,GO:0005576,GO:0016491,GO:0005737,GO:0043167,GO:0019748,GO:0006725
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G39330
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable cinnamyl alcohol dehydrogenase 9
OrthoDB(1 item)
183461at33090
Alcohol dehydrogenase, N-terminal
Pfam(2 items)
 
Alcohol dehydrogenase GroES-like domain
 
Zinc-binding dehydrogenase
InterPro(6 items)
 
Alcohol dehydrogenase, C-terminal
 
Alcohol dehydrogenase, N-terminal
 
GroES-like_sf
 
NAD(P)-bd_dom_sf
Gene ontology(8 items)
MF
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
MF
cinnamyl-alcohol dehydrogenase activity
MF
sinapyl alcohol dehydrogenase activity
CC
plasma membrane
BP
lignin biosynthetic process
MF
zinc ion binding
GO slim(7 items)
CC
extracellular region
MF
oxidoreductase activity
BP
secondary metabolic process
BP
cellular aromatic compound metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.