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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G39210.1
PEP
AT4G39210.1
Position on the Genome Chromosome Chr4
Start Position 18260332
End Position 18263181
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00200259
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glucose-1-phosphate adenylyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Glucose-1-phosphate adenylyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00483
Pfam Description Details
InterPro ID
IPR005835,IPR011831,IPR029044,IPR011004
InterPro Description Details
GO ID
GO:0008878,GO:0019252,GO:0009507,GO:0005978,GO:0005524
GO Description Details
GOslim ID
GO:0009059,GO:0000166,GO:0005976,GO:0016740,GO:0009536,GO:0006112,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Glucose-1-phosphate adenylyltransferase
OrthoDB(1 item)
44240at33090
Glucose-1-phosphate adenylyltransferase
Pfam(1 item)
 
Nucleotidyl transferase
InterPro(4 items)
 
Nucleotidyl transferase domain
 
ADP-Glc_PPase
 
Nucleotide-diphossugar_trans
 
Trimer_LpxA-like_sf
Gene ontology(5 items)
MF
glucose-1-phosphate adenylyltransferase activity
BP
starch biosynthetic process
BP
glycogen biosynthetic process
GO slim(7 items)
BP
macromolecule biosynthetic process
MF
nucleotide binding
BP
polysaccharide metabolic process
MF
transferase activity
BP
energy reserve metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.