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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G37610.1
PEP
AT4G37610.1
Position on the Genome Chromosome Chr4
Start Position 17670606
End Position 17671992
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00294017
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
BTB/POZ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
BTB/POZ and TAZ domain-containing protein 5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02135,PF00651
Pfam Description Details
InterPro ID
IPR035898,IPR000210,IPR000197,IPR011333
InterPro Description Details
GO ID
GO:0005516,GO:0042542,GO:0016567,GO:0006355,GO:0009751,GO:0009409,GO:0009733,GO:0046872,GO:0010200,GO:0005737
GO Description Details
GOslim ID
GO:0006464,GO:0050789,GO:0050896,GO:0006351,GO:0043167,GO:0005515,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
BTB/POZ and TAZ domain-containing protein 5
OrthoDB(1 item)
161143at33090
BTB/POZ domain
Pfam(2 items)
 
TAZ zinc finger
 
BTB/POZ domain
InterPro(4 items)
 
BTB/POZ domain
 
Zinc finger, TAZ-type
 
SKP1/BTB/POZ_sf
Gene ontology(10 items)
MF
calmodulin binding
BP
response to hydrogen peroxide
BP
protein ubiquitination
BP
regulation of transcription, DNA-templated
BP
response to salicylic acid
BP
response to cold
BP
response to auxin
MF
metal ion binding
BP
response to chitin
GO slim(7 items)
BP
cellular protein modification process
BP
regulation of biological process
BP
response to stimulus
BP
transcription, DNA-templated
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.