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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G36920.1
PEP
AT4G36920.1
Position on the Genome Chromosome Chr4
Start Position 17400998
End Position 17403140
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00163439
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AP2/ERF domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Floral homeotic protein APETALA 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00847
Pfam Description Details
InterPro ID
IPR036955,IPR016177,IPR001471
InterPro Description Details
GO ID
GO:0010093,GO:0030154,GO:0003700,GO:0010073,GO:0048316,GO:0003677,GO:0009908,GO:0048481,GO:0005634
GO Description Details
GOslim ID
GO:0032502,GO:0000003,GO:0032501,GO:0006351,GO:0050789,GO:0005634,GO:0003676,GO:0065009
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
AP2 family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G36920
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Floral homeotic protein APETALA 2
OrthoDB(1 item)
167667at33090
AP2/ERF domain
Pfam(1 item)
 
AP2 domain
InterPro(3 items)
 
AP2/ERF_dom_sf
 
DNA-bd_dom_sf
 
AP2/ERF domain
Gene ontology(9 items)
BP
specification of floral organ identity
BP
cell differentiation
MF
DNA-binding transcription factor activity
BP
meristem maintenance
BP
seed development
BP
flower development
BP
plant ovule development
GO slim(8 items)
BP
developmental process
BP
multicellular organismal process
BP
transcription, DNA-templated
BP
regulation of biological process
MF
nucleic acid binding
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.