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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G36520.1
PEP
AT4G36520.1
Position on the Genome Chromosome Chr4
Start Position 17230589
End Position 17235435
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00565888
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DnaJ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Chaperone DnaJ-domain superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR036869,IPR001623
InterPro Description Details
GO ID
GO:0072318,GO:0006898,GO:0031982,GO:0005737,GO:0072583,GO:0030276,GO:0043231
GO Description Details
GOslim ID
GO:0016192,GO:0005737,GO:0061024,GO:0051261,GO:0031982,GO:0016050,GO:0043231,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Chaperone DnaJ-domain superfamily protein
OrthoDB(1 item)
137786at33090
DnaJ domain
InterPro(2 items)
Gene ontology(7 items)
BP
clathrin coat disassembly
BP
receptor-mediated endocytosis
BP
clathrin-dependent endocytosis
MF
clathrin binding
CC
intracellular membrane-bounded organelle
GO slim(8 items)
BP
vesicle-mediated transport
BP
membrane organization
BP
protein depolymerization
BP
vesicle organization
CC
intracellular membrane-bounded organelle
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.