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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G31920.1
PEP
AT4G31920.1
Position on the Genome Chromosome Chr4
Start Position 15444290
End Position 15446766
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00140535
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Two-component response regulator
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Two-component response regulator ARR10
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00249,PF00072
Pfam Description Details
InterPro ID
IPR009057,IPR001005,IPR006447,IPR017053,IPR011006,IPR001789,IPR017930
InterPro Description Details
GO ID
GO:0003700,GO:0010492,GO:0080036,GO:0003677,GO:0080113,GO:0009736,GO:0000156,GO:0010380,GO:0005634,GO:0048364,GO:0009735,GO:0048367,GO:0080022,GO:0009414,GO:0031537,GO:0071368,GO:0010082
GO Description Details
GOslim ID
GO:0006807,GO:0050896,GO:0003676,GO:0032502,GO:0007154,GO:0050789,GO:0065009,GO:0032501,GO:0006725,GO:0006351,GO:0005575,GO:0042440,GO:0000003,GO:0040007,GO:0046483,GO:0060089,GO:0005634,GO:0044238
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ARR-B family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G31920
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Two-component response regulator ARR10
OrthoDB(1 item)
50699at33090
Two-component response regulator
Pfam(2 items)
 
Myb-like DNA-binding domain
 
Response regulator receiver domain
InterPro(7 items)
 
Homeobox-like_sf
 
SANT/Myb domain
 
Myb_dom_plants
 
Response_reg_B-typ_pln
 
CheY-like_superfamily
 
Signal transduction response regulator, receiver domain
Gene ontology(17 items)
MF
DNA-binding transcription factor activity
BP
maintenance of shoot apical meristem identity
BP
regulation of cytokinin-activated signaling pathway
BP
regulation of seed growth
BP
cytokinin-activated signaling pathway
MF
phosphorelay response regulator activity
BP
regulation of chlorophyll biosynthetic process
BP
root development
BP
response to cytokinin
BP
shoot system development
BP
primary root development
BP
response to water deprivation
BP
regulation of anthocyanin metabolic process
BP
cellular response to cytokinin stimulus
BP
regulation of root meristem growth
GO slim(18 items)
BP
nitrogen compound metabolic process
BP
response to stimulus
MF
nucleic acid binding
BP
developmental process
BP
cell communication
BP
regulation of biological process
BP
regulation of molecular function
BP
multicellular organismal process
BP
cellular aromatic compound metabolic process
BP
transcription, DNA-templated
CC
cellular_component
BP
pigment metabolic process
BP
heterocycle metabolic process
MF
molecular transducer activity
BP
primary metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.