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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G31550.1
PEP
AT4G31550.1
Position on the Genome Chromosome Chr4
Start Position 15290065
End Position 15291458
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00169220
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable WRKY transcription factor 11
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03106,PF10533
Pfam Description Details
InterPro ID
IPR036576,IPR003657,IPR018872
InterPro Description Details
GO ID
GO:0009617,GO:0005634,GO:0003700,GO:0010200,GO:0042742,GO:2000022,GO:0005516,GO:0043565,GO:0009682
GO Description Details
GOslim ID
GO:0050896,GO:0007154,GO:0002376,GO:0065009,GO:0003676,GO:0005634,GO:0050789,GO:0006351,GO:0044419,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Probable WRKY transcription factor 11
OrthoDB(1 item)
175927at33090
WRKY domain
Pfam(2 items)
 
WRKY DNA -binding domain
 
Plant zinc cluster domain
InterPro(3 items)
 
Zn-cluster domain
Gene ontology(9 items)
BP
response to bacterium
MF
DNA-binding transcription factor activity
BP
response to chitin
BP
defense response to bacterium
BP
regulation of jasmonic acid mediated signaling pathway
MF
calmodulin binding
MF
sequence-specific DNA binding
BP
induced systemic resistance
GO slim(10 items)
BP
response to stimulus
BP
cell communication
BP
immune system process
BP
regulation of molecular function
MF
nucleic acid binding
BP
regulation of biological process
BP
transcription, DNA-templated
BP
interspecies interaction between organisms
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.