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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G30940.1
PEP
AT4G30940.1
Position on the Genome Chromosome Chr4
Start Position 15055149
End Position 15056474
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00580681
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
BTB/POZ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
BTB/POZ domain-containing protein At4g30940
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02214
Pfam Description Details
InterPro ID
IPR036322,IPR003131,IPR000210,IPR015943,IPR011333
InterPro Description Details
GO ID
GO:0016567,GO:0051260
GO Description Details
GOslim ID
GO:0065003,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
BTB/POZ domain-containing protein At4g30940
OrthoDB(1 item)
64753at33090
BTB/POZ domain
Pfam(1 item)
 
BTB/POZ domain
InterPro(5 items)
 
WD40_repeat_dom_sf
 
Potassium channel tetramerisation-type BTB domain
 
BTB/POZ domain
 
WD40/YVTN_repeat-like_dom_sf
 
SKP1/BTB/POZ_sf
Gene ontology(2 items)
BP
protein ubiquitination
BP
protein homooligomerization
GO slim(2 items)
BP
protein-containing complex assembly
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.