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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G30320.1
PEP
AT4G30320.1
Position on the Genome Chromosome Chr4
Start Position 14835833
End Position 14836318
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00624019
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CAP domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00188
Pfam Description Details
InterPro ID
IPR035940,IPR018244,IPR002413,IPR001283,IPR014044
InterPro Description Details
GO ID
GO:0006952,GO:0005615,GO:0009607
GO Description Details
GOslim ID
GO:0050896,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
OrthoDB(1 item)
201730at33090
CAP domain
Pfam(1 item)
 
Cysteine-rich secretory protein family
InterPro(5 items)
 
Allrgn_V5/Tpx1_CS
 
V5_allergen-like
 
CRISP-related
Gene ontology(3 items)
BP
defense response
CC
extracellular space
BP
response to biotic stimulus
GO slim(2 items)
BP
response to stimulus
CC
extracellular region

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.