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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G27585.1
PEP
AT4G27585.1
Position on the Genome Chromosome Chr4
Start Position 13766984
End Position 13769832
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00318181
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Band 7, C-terminal extension
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
PHB domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF16200,PF01145
Pfam Description Details
InterPro ID
IPR032435,IPR036013,IPR001972,IPR001107
InterPro Description Details
GO ID
GO:0016020
GO Description Details
GOslim ID
GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
PHB domain-containing protein
OrthoDB(1 item)
158838at33090
Band 7, C-terminal extension
Pfam(2 items)
 
C-terminal region of band_7
 
SPFH domain / Band 7 family
InterPro(4 items)
 
Band 7, C-terminal extension
 
Band_7/SPFH_dom_sf
 
Stomatin_HflK_HflKC_fam
 
Band 7 domain
Gene ontology(1 item)
GO slim(1 item)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.