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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G27300.1
PEP
AT4G27300.1
Position on the Genome Chromosome Chr4
Start Position 13669308
End Position 13672348
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00359995
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Bulb-type lectin domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00954,PF11883,PF07714,PF01453,PF08276
Pfam Description Details
InterPro ID
IPR036426,IPR000858,IPR001480,IPR008271,IPR011009,IPR003609,IPR021820,IPR000719,IPR024171,IPR001245
InterPro Description Details
GO ID
GO:0005886,GO:0005516,GO:0009506,GO:0006468,GO:0016021,GO:0030246,GO:0005524,GO:0004674,GO:0048544,GO:0031625
GO Description Details
GOslim ID
GO:0043167,GO:0005515,GO:0000003,GO:0051704,GO:0006464,GO:0016020,GO:0008037,GO:0016740,GO:0000166,GO:0030246,GO:0006793,GO:0055044,GO:0007154,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1
OrthoDB(1 item)
20379at33090
Bulb-type lectin domain
Pfam(5 items)
 
S-locus glycoprotein domain
 
Domain of unknown function (DUF3403)
 
Protein tyrosine kinase
 
D-mannose binding lectin
 
PAN-like domain
InterPro(10 items)
 
Bulb-type_lectin_dom_sf
 
S-locus glycoprotein domain
 
Bulb-type lectin domain
 
Ser/Thr_kinase_AS
 
Kinase-like_dom_sf
 
PAN/Apple domain
 
S-locus receptor kinase, C-terminal
 
Protein kinase domain
 
SRK-like_kinase
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
Gene ontology(10 items)
CC
plasma membrane
MF
calmodulin binding
BP
protein phosphorylation
CC
integral component of membrane
MF
carbohydrate binding
MF
protein serine/threonine kinase activity
BP
recognition of pollen
MF
ubiquitin protein ligase binding
GO slim(14 items)
MF
protein binding
BP
multi-organism process
BP
cellular protein modification process
BP
cell recognition
MF
transferase activity
MF
nucleotide binding
MF
carbohydrate binding
BP
phosphorus metabolic process
BP
cell communication
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.