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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G22300.1
PEP
AT4G22300.1
Position on the Genome Chromosome Chr4
Start Position 11787560
End Position 11789252
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00308879
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Phospholipase/carboxylesterase/thioesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable carboxylesterase SOBER1-like
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02230
Pfam Description Details
InterPro ID
IPR029058,IPR003140
InterPro Description Details
GO ID
GO:0008474,GO:0002084,GO:0052689,GO:0006631,GO:0005886,GO:0005737
GO Description Details
GOslim ID
GO:0005737,GO:0016020,GO:0006082,GO:0043412,GO:0016787,GO:0009057,GO:0006464,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable carboxylesterase SOBER1-like
OrthoDB(1 item)
139101at33090
Phospholipase/carboxylesterase/thioesterase
Pfam(1 item)
 
Phospholipase/Carboxylesterase
InterPro(2 items)
 
Phospholipase/carboxylesterase/thioesterase
Gene ontology(6 items)
MF
palmitoyl-(protein) hydrolase activity
BP
protein depalmitoylation
MF
carboxylic ester hydrolase activity
BP
fatty acid metabolic process
CC
plasma membrane
GO slim(8 items)
BP
organic acid metabolic process
BP
macromolecule modification
MF
hydrolase activity
BP
macromolecule catabolic process
BP
cellular protein modification process
BP
cellular lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.