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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G20325.1
PEP
AT4G20325.1
Position on the Genome Chromosome Chr4
Start Position 10980124
End Position 10982426
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00179977
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ribonuclease H2 subunit B
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ribonuclease H2 subunit B
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF09468,PF17745
Pfam Description Details
InterPro ID
IPR019024,IPR041195,IPR040456
InterPro Description Details
GO ID
GO:0032299,GO:0005634
GO Description Details
GOslim ID
GO:0005634,GO:0032991
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ribonuclease H2 subunit B
OrthoDB(1 item)
161278at33090
ribonuclease H2 subunit B
Pfam(2 items)
 
Ydr279p protein family (RNase H2 complex component)
 
Ydr279_N
InterPro(3 items)
 
Ribonuclease H2, subunit B
Gene ontology(2 items)
CC
ribonuclease H2 complex
GO slim(2 items)
CC
protein-containing complex

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.