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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G17570.2
PEP
AT4G17570.2
Position on the Genome Chromosome Chr4
Start Position 9784329
End Position 9786644
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00824512
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, GATA-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
GATA transcription factor 26
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00320,PF13919
Pfam Description Details
InterPro ID
IPR028020,IPR000679,IPR013088
InterPro Description Details
GO ID
GO:0043565,GO:0003700,GO:0008270,GO:0005634
GO Description Details
GOslim ID
GO:0003676,GO:0050789,GO:0006351,GO:0065009,GO:0005634,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
GATA family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GATA transcription factor 26
OrthoDB(1 item)
51035at33090
Zinc finger, GATA-type
Pfam(2 items)
 
GATA zinc finger
 
Asx homology domain
InterPro(3 items)
 
ASX homology domain
 
Zinc finger, GATA-type
Gene ontology(4 items)
MF
sequence-specific DNA binding
MF
DNA-binding transcription factor activity
MF
zinc ion binding
GO slim(6 items)
MF
nucleic acid binding
BP
regulation of biological process
BP
transcription, DNA-templated
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.