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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G16990.12
PEP
AT4G16990.12
Position on the Genome Chromosome Chr4
Start Position 9560155
End Position 9565225
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00128052
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Disease resistance protein (TIR-NBS class)
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00931,PF01582,PF08381
Pfam Description Details
InterPro ID
IPR000157,IPR002182,IPR035897,IPR013591,IPR027417
InterPro Description Details
GO ID
GO:0043531,GO:0007165,GO:0050135,GO:0061809
GO Description Details
GOslim ID
GO:0050896,GO:0016787,GO:0043167,GO:0000166,GO:0007154,GO:0009975,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
OrthoDB(1 item)
53001at33090
Disease resistance protein (TIR-NBS class)
Pfam(3 items)
 
NB-ARC domain
 
TIR domain
 
Transcription factor regulating root and shoot growth via Pin3
InterPro(5 items)
 
Toll/interleukin-1 receptor homology (TIR) domain
 
Toll_tir_struct_dom_sf
 
Brevis radix (BRX) domain
 
P-loop_NTPase
Gene ontology(4 items)
BP
signal transduction
MF
NAD(P)+ nucleosidase activity
MF
NAD+ nucleotidase, cyclic ADP-ribose generating
GO slim(7 items)
BP
response to stimulus
MF
hydrolase activity
MF
nucleotide binding
BP
cell communication
MF
cyclase activity
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.