Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G16190.1
PEP
AT4G16190.1
Position on the Genome Chromosome Chr4
Start Position 9171512
End Position 9172877
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01449665
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cysteine peptidase, cysteine active site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable cysteine protease RD19C
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF08246,PF00112
Pfam Description Details
InterPro ID
IPR013201,IPR025661,IPR038765,IPR039417,IPR000668,IPR000169
InterPro Description Details
GO ID
GO:0005764,GO:0005615,GO:0005773,GO:0051603,GO:0004197,GO:0000323
GO Description Details
GOslim ID
GO:0006508,GO:0005576,GO:0005773,GO:0009057,GO:0008233
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G16190
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable cysteine protease RD19C
OrthoDB(1 item)
103094at33090
Cysteine peptidase, cysteine active site
Pfam(2 items)
 
Cathepsin propeptide inhibitor domain (I29)
 
Papain family cysteine protease
InterPro(6 items)
 
Cathepsin propeptide inhibitor domain (I29)
 
Papain-like_cys_pep_sf
 
Peptidase_C1A_papain-like
 
Peptidase C1A, papain C-terminal
Gene ontology(6 items)
CC
extracellular space
BP
proteolysis involved in cellular protein catabolic process
MF
cysteine-type endopeptidase activity
CC
lytic vacuole
GO slim(5 items)
CC
extracellular region
BP
macromolecule catabolic process
MF
peptidase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.