Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G14400.1
PEP
AT4G14400.1
Position on the Genome Chromosome Chr4
Start Position 8294668
End Position 8298360
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01199416
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ankyrin repeat-containing domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein ACCELERATED CELL DEATH 6
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12796,PF13962
Pfam Description Details
InterPro ID
IPR036770,IPR026961,IPR032846,IPR020683,IPR002110
InterPro Description Details
GO ID
GO:0009816,GO:0009615,GO:0030176,GO:0009751,GO:0050826,GO:1900426,GO:1900150,GO:0016567,GO:0071446,GO:0008219,GO:1902290,GO:0005887,GO:0016020,GO:2000031,GO:0009416,GO:0009617
GO Description Details
GOslim ID
GO:0044419,GO:0050789,GO:0016020,GO:0050896,GO:0002376,GO:0007154,GO:0005783,GO:0008150,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein ACCELERATED CELL DEATH 6
OrthoDB(1 item)
55753at33090
Ankyrin repeat-containing domain
Pfam(2 items)
 
Ankyrin repeats (3 copies)
 
Domain of unknown function
InterPro(5 items)
 
Ankyrin_rpt-contain_sf
 
Ankyrin repeat-containing domain
 
Ankyrin repeat
Gene ontology(16 items)
BP
defense response to bacterium
BP
response to virus
CC
integral component of endoplasmic reticulum membrane
BP
response to salicylic acid
BP
response to freezing
BP
positive regulation of defense response to bacterium
BP
regulation of defense response to fungus
BP
protein ubiquitination
BP
cellular response to salicylic acid stimulus
BP
positive regulation of defense response to oomycetes
CC
integral component of plasma membrane
BP
regulation of salicylic acid mediated signaling pathway
BP
response to light stimulus
BP
response to bacterium
GO slim(9 items)
BP
interspecies interaction between organisms
BP
regulation of biological process
BP
response to stimulus
BP
immune system process
BP
cell communication
CC
endoplasmic reticulum
BP
biological_process
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.