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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G13640.2
PEP
AT4G13640.2
Position on the Genome Chromosome Chr4
Start Position 7936864
End Position 7938497
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00635266
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein PHR1-LIKE 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14379,PF00249
Pfam Description Details
InterPro ID
IPR017930,IPR006447,IPR009057,IPR025756,IPR001005
InterPro Description Details
GO ID
GO:0003700,GO:0005634,GO:0010628,GO:0043565,GO:0009567
GO Description Details
GOslim ID
GO:0005634,GO:0003676,GO:0043170,GO:0006351,GO:0000003,GO:0051704,GO:0065009,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
G2-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein PHR1-LIKE 3
OrthoDB(1 item)
139681at33090
Myb domain
Pfam(2 items)
 
MYB-CC type transfactor, LHEQLE motif
 
Myb-like DNA-binding domain
InterPro(5 items)
 
Myb_dom_plants
 
Homeobox-like_sf
 
MYB-CC type transcription factor, LHEQLE-containing domain
 
SANT/Myb domain
Gene ontology(5 items)
MF
DNA-binding transcription factor activity
BP
positive regulation of gene expression
MF
sequence-specific DNA binding
BP
double fertilization forming a zygote and endosperm
GO slim(8 items)
MF
nucleic acid binding
BP
macromolecule metabolic process
BP
transcription, DNA-templated
BP
multi-organism process
BP
regulation of molecular function
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.