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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G10310.1
PEP
AT4G10310.1
Position on the Genome Chromosome Chr4
Start Position 6392008
End Position 6395667
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00192109
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cation transporter
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Sodium transporter HKT1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02386
Pfam Description Details
InterPro ID
IPR004773,IPR003445
InterPro Description Details
GO ID
GO:0005886,GO:0006970,GO:0015081,GO:0006813,GO:0006814,GO:0016021,GO:0008324,GO:0009651,GO:0015079
GO Description Details
GOslim ID
GO:0050896,GO:0006811,GO:0016020,GO:0005215
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Sodium transporter HKT1
OrthoDB(1 item)
88173at33090
Cation transporter
Pfam(1 item)
 
Cation transport protein
InterPro(2 items)
 
K/Na_transp_Trk/HKT
 
Cation transporter
Gene ontology(9 items)
CC
plasma membrane
BP
response to osmotic stress
MF
sodium ion transmembrane transporter activity
BP
potassium ion transport
BP
sodium ion transport
CC
integral component of membrane
MF
cation transmembrane transporter activity
BP
response to salt stress
MF
potassium ion transmembrane transporter activity
GO slim(4 items)
BP
response to stimulus
BP
ion transport
MF
transporter activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.