Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G08390.1
PEP
AT4G08390.1
Position on the Genome Chromosome Chr4
Start Position 5314999
End Position 5317071
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01352530
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Haem peroxidase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
L-ascorbate peroxidase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00141
Pfam Description Details
InterPro ID
IPR002207,IPR019793,IPR010255,IPR002016
InterPro Description Details
GO ID
GO:0020037,GO:0016688,GO:0006979,GO:0046872
GO Description Details
GOslim ID
GO:0046906,GO:0016209,GO:0043167,GO:0050896,GO:0016491
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
L-ascorbate peroxidase
OrthoDB(1 item)
145132at33090
Haem peroxidase
Pfam(1 item)
 
Peroxidase
InterPro(4 items)
 
Peroxidases_heam-ligand_BS
 
Haem_peroxidase_sf
 
Haem peroxidase, plant/fungal/bacterial
Gene ontology(4 items)
MF
L-ascorbate peroxidase activity
BP
response to oxidative stress
MF
metal ion binding
GO slim(5 items)
MF
tetrapyrrole binding
MF
antioxidant activity
BP
response to stimulus
MF
oxidoreductase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.