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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G04950.1
PEP
AT4G04950.1
Position on the Genome Chromosome Chr4
Start Position 2517882
End Position 2519924
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00390365
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glutaredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Monothiol glutaredoxin-S17
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00462,PF00085
Pfam Description Details
InterPro ID
IPR013766,IPR036249,IPR033658,IPR002109,IPR004480
InterPro Description Details
GO ID
GO:0009055,GO:0009926,GO:0072593,GO:0006974,GO:0015035,GO:0051537,GO:0005829,GO:0009408,GO:0051726,GO:0005634,GO:0046872,GO:0006879
GO Description Details
GOslim ID
GO:0050896,GO:0005634,GO:0009914,GO:0005737,GO:0065008,GO:0016491,GO:0043167,GO:0007049,GO:0009055,GO:0051540,GO:0008152,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Monothiol glutaredoxin-S17
OrthoDB(1 item)
190960at33090
Glutaredoxin
Pfam(2 items)
 
Glutaredoxin
 
Thioredoxin
InterPro(5 items)
 
Thioredoxin domain
 
Thioredoxin-like_sf
 
GRX_PICOT-like
 
Monothiol_GRX-rel
Gene ontology(12 items)
MF
electron transfer activity
BP
auxin polar transport
BP
reactive oxygen species metabolic process
BP
cellular response to DNA damage stimulus
MF
protein disulfide oxidoreductase activity
MF
2 iron, 2 sulfur cluster binding
BP
response to heat
BP
regulation of cell cycle
MF
metal ion binding
BP
cellular iron ion homeostasis
GO slim(12 items)
BP
response to stimulus
BP
hormone transport
BP
regulation of biological quality
MF
oxidoreductase activity
MF
electron transfer activity
MF
metal cluster binding
BP
metabolic process
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.