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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G03550.1
PEP
AT4G03550.1
Position on the Genome Chromosome Chr4
Start Position 1573513
End Position 1579195
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00141464
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
1,3-beta-glucan synthase subunit FKS1-like, domain-1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
1,3-beta-glucan synthase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02364,PF14288
Pfam Description Details
InterPro ID
IPR003440,IPR026899
InterPro Description Details
GO ID
GO:0000148,GO:0003843,GO:0071555,GO:0016021,GO:0006075,GO:0008360
GO Description Details
GOslim ID
GO:0032502,GO:0065008,GO:0016020,GO:0071555,GO:0005976,GO:0016740,GO:0050789,GO:0032991,GO:0009059
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
1,3-beta-glucan synthase
OrthoDB(1 item)
970at33090
1,3-beta-glucan synthase subunit FKS1-like, domain-1
Pfam(2 items)
 
1,3-beta-glucan synthase component
 
1,3-beta-glucan synthase subunit FKS1, domain-1
InterPro(2 items)
 
Glycosyl transferase, family 48
 
1,3-beta-glucan synthase subunit FKS1-like, domain-1
Gene ontology(6 items)
CC
1,3-beta-D-glucan synthase complex
MF
1,3-beta-D-glucan synthase activity
BP
cell wall organization
CC
integral component of membrane
BP
(1->3)-beta-D-glucan biosynthetic process
BP
regulation of cell shape
GO slim(9 items)
BP
developmental process
BP
regulation of biological quality
BP
cell wall organization
BP
polysaccharide metabolic process
MF
transferase activity
BP
regulation of biological process
CC
protein-containing complex
BP
macromolecule biosynthetic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.