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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G03390.1
PEP
AT4G03390.1
Position on the Genome Chromosome Chr4
Start Position 1490912
End Position 1494553
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00057000
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein STRUBBELIG-RECEPTOR FAMILY 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07714,PF08263
Pfam Description Details
InterPro ID
IPR013210,IPR001245,IPR032675,IPR011009,IPR000719
InterPro Description Details
GO ID
GO:0004672,GO:0007623,GO:0016021,GO:0005524,GO:0006468,GO:0005886
GO Description Details
GOslim ID
GO:0000166,GO:0006464,GO:0006793,GO:0016020,GO:0016740,GO:0048511,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein STRUBBELIG-RECEPTOR FAMILY 3
OrthoDB(1 item)
44111at33090
Leucine-rich repeat
Pfam(2 items)
 
Protein tyrosine kinase
 
Leucine rich repeat N-terminal domain
InterPro(5 items)
 
Leucine-rich repeat-containing N-terminal, plant-type
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
 
Kinase-like_dom_sf
 
Protein kinase domain
Gene ontology(6 items)
MF
protein kinase activity
BP
circadian rhythm
CC
integral component of membrane
BP
protein phosphorylation
CC
plasma membrane
GO slim(7 items)
MF
nucleotide binding
BP
cellular protein modification process
BP
phosphorus metabolic process
MF
transferase activity
BP
rhythmic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.