Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G02300.1
PEP
AT4G02300.1
Position on the Genome Chromosome Chr4
Start Position 1009366
End Position 1013034
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00217320
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pectinesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable pectinesterase/pectinesterase inhibitor 39
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01095,PF04043
Pfam Description Details
InterPro ID
IPR000070,IPR033131,IPR035513,IPR012334,IPR006501,IPR011050
InterPro Description Details
GO ID
GO:0050829,GO:0030599,GO:0046910,GO:0005618,GO:0042545,GO:0045490,GO:0045330,GO:0005576
GO Description Details
GOslim ID
GO:0005576,GO:0016787,GO:0005618,GO:0071555,GO:0030234,GO:0050896,GO:0005976,GO:0009057,GO:0044419
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G02300
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.