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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G01800.2
PEP
AT4G01800.2
Position on the Genome Chromosome Chr4
Start Position 770926
End Position 776134
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01908471
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SecA, preprotein cross-linking domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Chloroplast protein-transporting ATPase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01043,PF07516,PF07517
Pfam Description Details
InterPro ID
IPR036670,IPR011130,IPR027417,IPR036266,IPR011116,IPR020937,IPR000185,IPR014018,IPR011115
InterPro Description Details
GO ID
GO:0009646,GO:0017038,GO:0009941,GO:0005524,GO:0006605,GO:0015450,GO:0016020,GO:0009658,GO:0010109,GO:0009507,GO:0009570,GO:0010090,GO:0016464
GO Description Details
GOslim ID
GO:0000166,GO:0032502,GO:0009657,GO:0015979,GO:0043167,GO:0009536,GO:0015031,GO:0016787,GO:0006810,GO:0005575,GO:0051641,GO:0016020,GO:0005215,GO:0050896,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Chloroplast protein-transporting ATPase
OrthoDB(1 item)
6937at33090
SecA, preprotein cross-linking domain
Pfam(3 items)
 
SecA preprotein cross-linking domain
 
SecA Wing and Scaffold domain
 
SecA DEAD-like domain
InterPro(9 items)
 
SecA_X-link_sf
 
SecA, preprotein cross-linking domain
 
P-loop_NTPase
 
SecA_Wing/Scaffold_sf
 
SecA Wing/Scaffold
 
SecA_motor_DEAD
 
SecA DEAD-like, N-terminal
Gene ontology(13 items)
BP
response to absence of light
BP
protein import
CC
chloroplast envelope
BP
protein targeting
MF
P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BP
chloroplast organization
BP
regulation of photosynthesis
CC
chloroplast stroma
BP
trichome morphogenesis
MF
chloroplast protein-transporting ATPase activity
GO slim(15 items)
MF
nucleotide binding
BP
developmental process
BP
plastid organization
BP
photosynthesis
BP
protein transport
MF
hydrolase activity
CC
cellular_component
BP
cellular localization
MF
transporter activity
BP
response to stimulus
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.