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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G01720.1
PEP
AT4G01720.1
Position on the Genome Chromosome Chr4
Start Position 744949
End Position 748219
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00118043
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
WRKY47
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03106
Pfam Description Details
InterPro ID
IPR003657,IPR036576
InterPro Description Details
GO ID
GO:0003700,GO:0043565,GO:0005634
GO Description Details
GOslim ID
GO:0050789,GO:0065009,GO:0003676,GO:0005634,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
118489at33090
WRKY domain
Pfam(1 item)
 
WRKY DNA -binding domain
InterPro(2 items)
Gene ontology(3 items)
MF
DNA-binding transcription factor activity
MF
sequence-specific DNA binding
GO slim(5 items)
BP
regulation of biological process
BP
regulation of molecular function
MF
nucleic acid binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.