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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G01250.1
PEP
AT4G01250.1
Position on the Genome Chromosome Chr4
Start Position 522839
End Position 524129
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00636451
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
WRKY transcription factor 22
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF03106
Pfam Description Details
InterPro ID
IPR036576,IPR003657
InterPro Description Details
GO ID
GO:0005634,GO:0071456,GO:0003700,GO:0043565,GO:0000976,GO:0010150,GO:0006952,GO:0010200
GO Description Details
GOslim ID
GO:0050896,GO:0050789,GO:0006351,GO:0003676,GO:0065009,GO:0005634,GO:0032502,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G01250
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
WRKY transcription factor 22
OrthoDB(1 item)
170235at33090
WRKY domain
Pfam(1 item)
 
WRKY DNA -binding domain
InterPro(2 items)
Gene ontology(8 items)
BP
cellular response to hypoxia
MF
DNA-binding transcription factor activity
MF
sequence-specific DNA binding
MF
transcription regulatory region sequence-specific DNA binding
BP
leaf senescence
BP
defense response
BP
response to chitin
GO slim(8 items)
BP
response to stimulus
BP
regulation of biological process
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
regulation of molecular function
BP
developmental process
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.