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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G00600.1
PEP
AT4G00600.1
Position on the Genome Chromosome Chr4
Start Position 255320
End Position 256610
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01389275
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Bifunctional protein FolD 3, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02882,PF00763
Pfam Description Details
InterPro ID
IPR020630,IPR000672,IPR036291,IPR020631
InterPro Description Details
GO ID
GO:0035999,GO:0004477,GO:0009853,GO:0005829,GO:0006730,GO:0004488,GO:0009507
GO Description Details
GOslim ID
GO:0046483,GO:0006082,GO:0043094,GO:0005737,GO:0016491,GO:0016787,GO:0043603,GO:0006730,GO:0009536,GO:0006725
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Bifunctional protein FolD 3, chloroplastic
OrthoDB(1 item)
141782at33090
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Pfam(2 items)
 
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
 
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
InterPro(4 items)
 
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
 
THF_DH/CycHdrlase
 
NAD(P)-bd_dom_sf
 
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Gene ontology(7 items)
BP
tetrahydrofolate interconversion
MF
methenyltetrahydrofolate cyclohydrolase activity
BP
photorespiration
BP
one-carbon metabolic process
MF
methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO slim(10 items)
BP
heterocycle metabolic process
BP
organic acid metabolic process
BP
cellular metabolic compound salvage
MF
oxidoreductase activity
MF
hydrolase activity
BP
cellular amide metabolic process
BP
one-carbon metabolic process
BP
cellular aromatic compound metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.